Research Article |
Corresponding author: Curt W. Harden ( c_har@fastmail.com ) Academic editor: Srećko Ćurčić
© 2024 Curt W. Harden, Robert L. Davidson, Thomas E. Malabad, Michael S. Caterino, David R. Maddison.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Harden CW, Davidson RL, Malabad TE, Caterino MS, Maddison DR (2024) Phylogenetic systematics of the enigmatic genus Horologion Valentine, 1932 (Coleoptera, Carabidae, Trechinae, Horologionini), with description of a new species from Bath County, Virginia. Subterranean Biology 48: 1-49. https://doi.org/10.3897/subtbiol.48.114404
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Horologion Valentine, one of the rarest and most enigmatic carabid beetle genera in the world, was until now known only from the holotype of Horologion speokoites Valentine, discovered in 1931 in a small cave in West Virginia. A single specimen of a new species from Virginia was collected in 1991, but overlooked until 2018. DNA sequence data from specimens of this new species, Horologion hubbardi sp. nov., collected in 2022 and 2023, as well as a critical examination of the external morphology of both species, allow us to confidently place Horologion in the supertribe Trechitae, within a clade containing Bembidarenini and Trechini. A more specific placement as sister to the Gondwanan Bembidarenini is supported by DNA sequence data. Previous hypotheses placing Horologion in or near the tribes Anillini, Tachyini, Trechini, Patrobini, and Psydrini are rejected. The existence of two species of Horologion on opposite sides of the high mountains of the middle Appalachians suggests that these mountains are where the ancestral Horologion populations dispersed from, and predicts the discovery of additional populations and species. All specimens of H. hubbardi were collected in or near drip pools, and most were found dead, suggesting that the terrestrial epikarst, rather than caves, is the true habitat of Horologion, which explains their extreme rarity since epikarst has not been directly sampled. We recognize the tribe Horologionini, a relict lineage without any close relatives known in the Northern Hemisphere, and an important part of Appalachian biodiversity.
Appalachian Mountains, beetles, DNA, karst, micro-range endemic species, molecular phylogenetics, subterranean biodiversity, troglomorphy
For over 80 years, the genus Horologion has been known from a single specimen (Fig.
The beetle Valentine discovered was small, eyeless and densely pubescent, with a distinctive hourglass shaped body and shorter appendages than most other cave carabids (Fig.
Perhaps because Valentine’s description was so detailed, a redescription or reevaluation of H. speokoites has never been published that was based on study of the type itself. Other authors published hypotheses on the placement of the species, but the two most detailed and influential of these explicitly state that they were based solely on the study of
The opinion of van Emden prevailed in Ball’s review of the Carabidae of the United States, in which Horologion is placed in the tribe Psydrini without further comment (
In 2018, first author Curt Harden discovered a second specimen of Horologion in the Carnegie Museum of Natural History in Pittsburgh, Pennsylvania. The specimen was among recently-mounted material salvaged from evaporated ethanol vials found in the desk of the late Thomas C. Barr, Jr. after his death in 2011. The beetle had been collected and sent to Barr nearly three decades earlier, in 1991, but Barr apparently did not notice it among the several Pseudanophthlamus beetles in the same vial. This Horologion specimen possessed impressive humeral carinae ending in curved spines that were unlike any other carabid known from North America (Fig.
Working from the hypothesis that Horologion most likely inhabited deep soils rather than caves (
Habitat of species of Horologion A surface habitat at Williams Cave, Bath Co., VA B C. Harden (yellow helmet) and T. Malabad (red helmet) in microhabitat of H. hubbardi voucher CWH-452 in Williams Cave C C. Harden examining live H. hubbardi holotype in Williams Cave D live holotype male of H. hubbardi on surface of drip pool in Williams Cave E surface habitat at Arbuckle Cave, Greenbrier Co., WV F T. Malabad examining flowstone in Arbuckle Cave. Photo credit: C. Harden (A, E), K. Kosič Ficco (B–D), M. Miller (F).
With several intact specimens of both sexes, DNA sequence data, microhabitat observations, and a re-examination of the type of H. speokoites, we find ourselves in a position to offer new insights into the natural history and phylogenetic relationships of this mysterious and long misunderstood genus, and to describe the remarkable new species from Virginia.
Cave collecting was conducted in entrances, in the “twilight zone” where some light from the entrance still reaches and temperatures are influenced by surface conditions and throughout the extensive dark zone. Cover objects such as dead wood and rocks were turned and surfaces were carefully scanned for activity. Special attention was given to microhabitats with active drip pools. In Williams Cave, several bait stations were set. These consisted of small amounts of various baits (Taleggio and feta cheeses, tuna, peanut butter) placed beneath small piles of stones, and were left in place for 11 days and then inspected visually. Of these methods, visual scanning in and near drip pools was the only one that produced specimens of Horologion, which were collected into 95% ethanol using small brushes. Collecting was conducted under permit by the Virginia Department of Conservation and Recreation, Division of Natural Heritage (DCR-DNH).
Terminology follows that of
The number and position of marginal setiferous punctures commonly called the “umbilicate series” are frequently given taxonomic importance in studies of Trechinae (
Setae on the head were considered fixed if they and their pore-punctures were larger in diameter than the background pubescence, and if they were consistently positioned in the same approximate location across specimens of a species. Similarly, the number of fixed setae on the ligula was determined by counting only the larger and consistently placed setae. Determining setae as fixed does not mean they are necessarily considered homologous across taxa.
Lengths of body sections were made from calibrated images using Adobe Photoshop. Measurements are abbreviated in the description as follows: Apparent Body Length measured from tip of clypeus to apex of elytra (ABL), maximum head width (HW), maximum pronotum width (PW), pronotum posterior width measured at narrowest point (PbW), pronotum length along midline (PL), maximum elytral width (EL), and total antennal length as sum of measured length of each individual antennomere (AntL). All measurements were straightforward except for PbW, which was complicated by the lack of fixed setae or distinct angles at the posterior of the pronotum that could serve as landmarks. The measurement was taken across the point on each side at which the posterior margin begins to curve upward more steeply. Relative size and shape of some body regions are given as ratios of these measurements.
External structures were examined using Leica M80, M125, and M165 stereoscopes, with and without diffusion, at magnifications from 8× to 120×. Male and female genitalia were dissected from cleared abdomens following DNA extraction or digestion in warm 85% lactic acid, using Dumont #5 forceps (Item nos. 11251-20 and 11252-20, www.finescience.com/) and bent #000 and minuten insect pins held in short pin vises. Genitalia were studied in glycerin on depression slides using a Motic BA300 compound microscope and photographed using a Canon Powershot A2200 digital camera aimed through the eyepiece. Line drawings of genitalia were made by hand and traced using Adobe Illustrator. Digital photographs of external morphology were taken using a Visionary Digital Passport II system with a Canon 6D SLR and 65-mm MP-E 1–5× macro lens. Focus stacking was performed with Helicon Focus (www.heliconsoft.com). The resulting stacked images contain minor artifacts produced by the stacking process. Scanning electron microscope (SEM) images of uncoated specimens affixed to stubs with double sided tape were taken at 15.0 kV in BSE and BSE3D modes using a Hitachi S-3400 Variable Pressure SEM at the Clemson University Scanning Electron Microscopy Facility in Anderson, SC.
Specimens examined are deposited in the following collections:
Carnegie Museum of Natural History, Pittsburgh, Pennsylvania (
We follow the modified biological species concept of
DNA was extracted from the abdomen of the female paratype (voucher CWH-452) with ThermoFisher’s GeneJet extraction kit (Vilnius, Lithuania) using the manufacturer’s protocol. For the male holotype (voucher CWH-484), the same kit was used but the protocol was modified to extend the incubation period to overnight (~20 hours) and the volume of elution buffer was reduced from 200 µl to 130 µl, in two 65 µl additions incubated for 3 minutes each before centrifuging. Concentration of extracted DNA was quantified using a Qubit 3.0 Fluorometer.
Fragments of two nuclear ribosomal genes (18S and 28S), the mitochondrial protein-coding gene cytochrome oxidase I (COI), and five nuclear protein-coding genes (arginine kinase [ArgK], carbamoyl phosphate synthetase domain of the rudimentary gene [CAD2 and CAD4], wingless [Wg], topoisomerase I [Topo], Muscle-Specific Protein 300 [MSP]) were amplified using the primers from
Multiple chromatogram assembly and initial base calls were made using either Geneious (ver. 8.1.8; Auckland, NZ) or with Phred (
Sequence alignment was performed in Mesquite (
The 28S sequence of H. hubbardi contained four large insertions greater than 30 bp in length, the longest one being 136 bp. These and other ambiguously aligned regions of 18S and 28S were excluded using the modified GBLOCKS algorithm in Mesquite (
Our matrix included 259 taxa, representing all tribes of Trechitae as well as members of Patrobini and the three genera of Psydrini s. str. (Psydrus, Nomius, and Laccocenus) (Table
List of taxa sampled for molecular phylogenetic analyses. For information on vouchers of taxa other than Horologion, including identification resources, see
Outgroups |
Pterostichini |
Pterostichus melanarius (Illiger) |
Moriomorphini |
Amblytelus curtus continentalis Baehr |
Mecyclothorax vulcanus (Blackburn) |
Melisodera picipennis Westwood |
Meonis ater Castelnau |
Sitaphe parallelipennis Baehr |
Tropopterus canaliculus Liebherr |
Psydrini |
Laccocenus ambiguus Sloane |
Nomius pygmaeus (Dejean) |
Psydrus piceus LeConte |
Gehringiini |
Gehringia olympica Darlington |
Trechinae |
Supertribe Patrobitae |
Lissopogonini |
Lissopogonus sp. “Nepal: Likhu Khola” |
Patrobini |
Diplous aterrimus (Dejean) |
Diplous californicus (Motschulsky) |
Dimorphopatrobus ludmilae Casale & Sciaky |
Parapenetretus sp. “China: Yunnan 1” |
Patrobus lecontei Chaudoir |
Patrobus longicornis (Say) |
Patrobus septentrionis Dejean |
Penetretus temporalis Bedel |
Platidiolus vandykei Kumakov |
Qiangopatrobus sp. “China: Yunnan” |
Supertribe Trechitae |
Horologionini |
Horologion hubbardi sp. nov. |
Bembidarenini |
Andinodontis muellermotzfeldi Toledano & Erwin |
Andinodontis sp. “Ecuador: Vinillos” |
Argentinatachoides balli Sallenave, Erwin, & Roig-Juñent |
Argentinatachoides setiventre (Nègre) |
Argentinatachoides sp. “Argentina: Neuquen” |
Bembidarenas reicheellum (Csiki) |
Bembidarenas nr. reicheellum (Csiki) |
Tasmanitachoides angulicollis Baehr |
Tasmanitachoides baehri Maddison & Porch |
Tasmanitachoides erwini Maddison & Porch |
Tasmanitachoides fitzroyi (Darlington) |
Tasmanitachoides cf. gerdi Baehr |
Tasmanitachoides hobarti (Blackburn) |
Tasmanitachoides kingi (Darlington) |
Tasmanitachoides leai (Sloane) |
Tasmanitachoides lutus (Darlington) |
Tasmanitachoides murrumbidgensis (Sloane) |
Tasmanitachoides rufescens Baehr |
Tasmanitachoides wilsoni (Sloane) |
Tasmanitachoides sp. “Lerderderg R” |
Tasmanitachoides sp. “Angle Crossing #1” |
Tasmanitachoides sp. “Angle Crossing #2” |
Trechini: Trechodina |
Apoplotrechus strigipennis (Fairmaire) |
Cnides dostali Donabauer |
Cnides sp. “Mexico: Sonora” |
Cnides sp. “Ecuador: Orellana” |
Cyphotrechodes gibbipennis (Blackburn) |
Pachydesus bohemani (Jeannel) |
Pachydesus parilis (Péringuey) |
Pachydesus parvicollis (Jeannel) |
Pachydesus rufipes (Boheman) |
Paratrechodes macleayi (Sloane) |
Perileptus constricticeps (Sloane) |
Perileptus sloanei Moore |
Perileptus areolatus (Creutzer) |
Sporades sexpunctatus Fauvel |
Thalassophilus longicornis (Sturm) |
Trechobembix baldiensis baldiensis (Blackburn) |
Trechodes alluaudi Jeannel |
Trechodes bipartitus (MacLeay) |
Trechodes jeanneli jeanneli Mateu |
Trechodes sp. “India: Karnataka” |
Trechosiella laetula (Péringuey) |
Trechini: Trechina |
Aepopsis robinii (Laboulbene) |
Agonotrechus wuyipeng Deuve |
Aphaenops cerberus (Dieck) |
Blemus discus (Fabricius) |
Bothynotrechus castelnaui (Sloane) |
Darlingtonea kentuckensis Valentine |
Duvalius boldorii boldorii Jeannel |
Epaphiopsis grebennikovi Deuve |
Geotrechus orpheus (Dieck) |
Homaloderodes germaini Jeannel |
Iberotrechus bolivari (Jeannel) |
Kenodactylus audouini (Guérin-Méneville) |
Mexitrechus cf. michoacanus (Bolívar & Pieltain) |
Mimotrechus scitulus Moore |
Nototrechus unicolor Moore |
Omalodera dentimaculata Solier |
Omalodera limbata Blanchard |
Oxytrechus cf. lallemandi Jeannel |
Oxytrechus sp. “Chile: Villarrica” |
Oxytrechus sp. “Ecuador: Pichan” |
Paraphaenops breuilianus (Jeannel) |
Paratrechus halffteri Mateu |
Paratrechus maddisoni Deuve & Moret |
Pseudocnides monolcus (Putzeys) |
Pseudocnides rugosifrons (Jeannel) |
Tasmanorites intermedius Moore |
Trechimorphus cf. brunneus Moore |
Trechimorphus diemensensis (Bates) |
Tropidotrechus bawbawensis Moore |
Tropidotrechus victoriae (Blackburn) |
Trechinotus flavocinctus Jeannel |
Trechisibus antarcticus (Dejean) |
Trechisibus cyclopterus group #1 |
Trechisibus cyclopterus group #2 |
Trechoblemus westcotti Barr |
Trechus arizonae Casey |
Trechus coloradensis Schaeffer |
Trechus hydropicus beutenmuelleri Jeannel |
Trechus humboldti Van Dyke |
Trechus obtusus Erichson |
Trechus oregonensis Hatch |
Xenotrechus denticollis Barr & Krekeler |
Anillini |
Anillodes sp. “USA: California” |
Anillinus erwini Sokolov & Carlton |
Anillinus unicoi Sokolov |
Anillinus (langdoni group) sp. “USA: Georgia” |
Argiloborus nr. imerinae Jeannel |
Binaghites subalpinus (Baudi di Selve) |
Caeconannus rotundicollis Jeannel |
Geocharidius sp. “Mexico: Chiapas 1” |
Geocharidius sp. “Mexico: Chiapas 2” |
Illaphanus nr. matthewsi Giachino |
Medusapyga alsea LaBonte |
Medusapyga chehalis LaBonte |
Microdipnus jeanneli (Alluaud) |
Nesamblyops sp. “New Zealand: Mount Robert” |
Nesamblyops sp. “New Zealand: Tirohanga Track” |
Serranillus jeanneli Barr |
Serranillus dunavani (Jeannel) |
Typhlocharis armata Coiffait |
Sinozolini |
Chaltenia patagonica Roig-Juñent & Cicchino |
Phrypeus rickseckeri (Hayward) |
Sinozolus sp. “China: Sichuan” |
Zolini |
Merizodus sp. “Chile: Valdivia” |
Oopterus laevicollis Bates |
Oopterus laeviventris (Sharp) |
Pseudoopterus cf. latipennis (Broun) |
Sloaneana lamingtonensis Baehr |
Sloaneana tasmaniae (Sloane) |
Sloaneana sp. “VIC: Acheron Gap” |
Zolus wongi Larochelle & Larivière |
Bembidiini |
Amerizus wingatei (Bland) |
Amerizus (Tiruka) sp. “China: Yunnan” |
Asaphidion alaskanum Wickham |
Asaphidion curtum curtum (Heyden) |
Asaphidion yukonense Wickham |
Bembidion obtusum Audinet-Serville |
Bembidion tethys Netolitzky |
Bembidion aestuarii (Uéno & Habu) |
Bembidion anthracinum Germain |
Bembidion approximatum (LeConte) |
Bembidion assimile Gyllenhal |
Bembidion biguttatum (Fabricius) |
Bembidion bimaculatum (Kirby) |
Bembidion californicum Hayward |
Bembidion clemens Casey |
Bembidion ephippium (Marsham) |
Bembidion errans Blackburn |
Bembidion fortestriatum (Motschulsky) |
Bembidion genei illigeri Netolitzky |
Bembidion geniculatum Heer |
Bembidion incisum Andrewes |
Bembidion iridescens (LeConte) |
Bembidion kasaharai (Habu) |
Bembidion laticeps (LeConte) |
Bembidion leptaleum Andrewes |
Bembidion levigatum Say |
Bembidion lonae Jensen-Haarup |
Bembidion lunulatum (Geoffroy) |
Bembidion mandibulare Solier |
Bembidion mundum (LeConte) |
Bembidion nigropiceum (Marsham) |
Bembidion quadrimaculatum dubitans (LeConte) |
Bembidion planatum (LeConte) |
Bembidion planum (Haldeman) |
Bembidion punctulatum Drapiez |
Bembidion rothfelsi Maddison |
Bembidion salinarium Casey |
Bembidion solieri Gemminger & Harold |
Bembidion turbatum Casey |
Bembidion transversale Dejean |
Bembidion umbratum (LeConte) |
Bembidion variegatum Say |
Bembidion versicolor (LeConte) |
Bembidion vile (LeConte) |
Bembidion wickhami Hayward |
Bembidion yokohamae (Bates) |
Bembidion (Hoquedela) sp. “China: Yunnan” |
Bembidion sp. “Inuvik” |
Lionepha casta (Casey) |
Lionepha disjuncta (Lindroth) |
Lionepha pseudoerasa (Lindroth) |
Ocys harpaloides (Audinet-Serville) |
Orzolina thalassophila Machado |
Sinechostictus cribrum stenacrus (De Monte) |
Sinechostictus elongatus (Dejean) |
Sinechostictus sp. “China: Yunnan” |
Pogonini |
Diplochaetus planatus (G.H. Horn) |
Pogonistes gracilis (Dejean) |
Pogonus chalceus (Marsham) |
Pogonus meridionalis Dejean |
Pogonus texanus Chaudoir |
Sirdenus grayii (Wollaston) |
Thalassotrechus barbarae (G.H. Horn) |
Tachyini: Tachyina |
Anomotachys acaroides (Motschulsky) |
Elaphropus cf. haliploides (Bates) #1 |
Elaphropus sp. “Madagascar” |
Elaphropus sp. “Gabon: Ngounié” |
Lymnastis sp. “Australia: Queensland” |
Lymnastis sp. “Malaysia: Sabah” |
Meotachys riparius Boyd & Erwin |
Meotachys sp. “Ecuador: Orellana” |
Micratopus sp. “Ecuador: Orellana” |
Micratopus sp. “Panama” |
Micratopus sp. “USA: Arizona” |
Nothoderis rufotestacea (Hayward) |
Nothoderis tantilla (Motschulsky) |
Nothoderis sp. “Ecuador: Napo 2” |
Paratachys bistriatus (Duftschmid) |
Paratachys terryli Liebherr |
Paratachys vorax (LeConte) |
Paratachys sp. “Madagascar” |
Paratachys sp. “India: Karnataka” |
Paratachys sp. “RSA: Limpopo” |
Pericompsus braziliensis (Sahlberg) |
Pericompsus australis (Schaum) |
Pericompsus circuliformis (Solier) |
Pericompsus laetulus LeConte |
Pericompsus metallicus Bates |
Pericompsus punctipennis (Macleay) |
Pericompsus sellatus LeConte |
Pericompsus semistriatus (Blackburn) |
Polyderis laeva (Say) |
Polyderis ochrioides (Darlington) |
Porotachys bisulcatus (Nicolai) |
Porotachys ottomanus Schweiger |
Tachys argentinicus Csiki |
Tachys corax LeConte |
Tachys luxus Andrewes |
Tachys scutellaris Stephens |
Tachys vittiger LeConte |
Tachyta (Eurytachyta) sp. “Malaysia: Sarawak” |
Tachyta (Paratachyta) nr. philipi #2 |
Tachyta inornata (Say) |
Tachyta picina (Boheman) |
Tachyura apicalis (Boheman) |
Tachyura loriae (Andrewes) |
Tachyura nervosa (Sloane) |
Tachyura nr. obesula (LeConte) |
Tachyura sp. “RSA: North Cape” |
Tachyini: Xystosomina |
Erwiniana eugeneae (Erwin) |
Erwiniana hilaris (Bates) |
Erwiniana nr. crassa (Erwin) |
Gouleta cayennense (Dejean) |
Kiwitachys antarcticus (Bates) |
Kiwitachys latipennis (Sharp) |
Mioptachys nr. oopteroides Bates |
Mioptachys sp. “Ecuador: Bellavista” |
Mioptachys flavicauda (Say) |
Mioptachys sp. “Peru: Iquitos” |
Philipis bicolor Baehr |
Philipis lawrencei Baehr |
Philipis subtropica Baehr |
Maximum likelihood analyses of single gene and concatenated matrices were conducted using IQ-TREE version 2.2.0 (
Clade support was measured with standard nonparametric bootstrapping using IQ-TREE, with 500 bootstrap replicates for single genes and the 8-gene concatenated matrix. Ultrafast bootstrapping was also performed for each of these matrices in IQ-TREE, with 1000 replicates, including the SH-aLRT test with 1000 replicates (
A NEXUS file containing the data matrices and the inferred trees has been deposited in Dryad (available at doi: 10.5061/dryad.73n5tb33p).
DNA was successfully extracted from both fresh Horologion specimens. The extraction from the female paratype had low concentration of DNA (0.0380 ng/µL). Nevertheless, sequences of all 8 target genes were successfully amplified. The extraction from the male holotype had a much higher concentration of DNA (0.220 ng/µL).
Maximum likelihood analysis of the 8-gene concatenated matrix produced a tree with a topology of deeper lineages nearly identical to that of
Support for and against our preferred hypothetical placement of Horologion. Black: clade present in maximum likelihood tree, SBS 90% or greater, UFBoot 95% or greater and SH-aLRT 80 or greater. Grey: clade present in maximum likelihood tree, SBS less than 90%, UFBoot less than 95% and/or SH-aLRT less than 80. Red: clade absent in maximum likelihood tree, most-supported contradictory clade with SBS 50% or greater, UFBoot 95% or greater and SH-aLRT 80 or greater. Pink: clade absent in maximum likelihood tree, most-supported contradictory clade with SBS less than 50%, UFBoot less than 95% and/or SH-aLRT less than 80.
Support for and against previously proposed placements of Horologion. Grey: clade present in maximum likelihood tree, SBS less than 90%, UFBoot less than 95% and/or SH-aLRT less than 80. Red: clade absent in maximum likelihood tree, most-supported contradictory clade with SBS 90% or greater, UFBoot 95% or greater and SH-aLRT 80 or greater. Pink: clade absent in maximum likelihood tree, most-supported contradictory clade with SBS less than 50%, UFBoot less than 95% and/or SH-aLRT less than 80. There were not sufficient sequences available for COI and Topo from our sampled Psydrini.
Horologionidae Jeannel, 1949: 91. Type genus: Horologion Valentine, 1932.
Horologionini:
Horologionina:
The tribe consists of a single genus, Horologion, described in detail below. Members of the tribe possess characteristics of the supertribe Trechitae and several character states that, in combination, distinguish them from other tribes of Carabidae: eyes absent, frontal furrows weakly impressed, penultimate maxillary palpomeres glabrous, apical maxillary palpomeres elongate and narrow, pronotal lateral margins and hind angles absent, elytral humeri with carinate shelf, elytron with a single discal setigerous puncture, apical recurrent stria absent, mesoventrite bell-shaped and extended anteriorly, mesocoxae and metacoxae separated by processes of mesoventrite and metaventrite, all surfaces of external integument except for mouthparts and abdominal tergites generally setose, median lobe of aedeagus open dorsally, spermatheca with attached gland, female genital segment subtriangular, gonocoxites slender and largely glabrous.
Small, eyeless, pubescent beetles with short appendages and pedunculate body form. Head with one supraorbital seta on each side and a posterior row of three to five pairs of inwardly curved macrosetae. Mandibles with scrobal seta present, elongate and similar in shape. Clypeus with two pairs of fixed setae. Head with frontal furrows weakly impressed and poorly defined. Labrum with six fixed setae. Ligula with four large fixed setae, inner pair fused. Head ventrally with suborbital seta on each side. Pronotum strongly constricted posteriorly, lacking posterior angles and posterior marginal setae. Elytral humeri modified, with a raised carinate shelf of variable length and shape. Eight umbilicate punctures along margin of elytra, subapical seta (sensu
Holotype male (
The lone specimen of this species differs from H. hubbardi in the following characters: the carinal shelf of the humerus is shorter and does not end in a prominent curved spine; the elytral disc is more convex, though not nearly as convex as in
Genitalia of Horologion species A H. speokoites median lobe, left lateral aspect B H. speokoites left paramere, left lateral aspect C H. speokoites median lobe, dorsal aspect D H. hubbardi median lobe, left lateral aspect E H. hubbardi left paramere, left lateral aspect F H. hubbardi median lobe, dorsal aspect G H. hubbardi right paramere, right lateral aspect H H. hubbardi female genitalia, ventral aspect A–C after
Our examination of the type of H. speokoites revealed that the specimen differs from Valentine’s description and drawings in several important characters. The first protarsomere is asymmetrical and distinctly dentate on the inner margin, and the second is slightly asymmetrical though not dentate (Fig.
Holotype male (Suppl. material
Paratypes (n = 4): One female (
One female (
Two males (
Fragments of three specimens, one male, one female, and one unknown sex, in alcohol vials (
From Horologion speokoites, this species differs in the following external characters: the elytral humeri have longer carinal shelves that terminate in a sharp, curved spine (Fig.
Scanning electron microscope images of Horologion hubbardi female paratype, voucher CWH-452 (
Habitus
: Average sized for Trechinae (ABL = 3.16–3.20 mm), pubescent, without trace of eyes. Variable in color, dark castaneous in the 1991 specimen (Suppl. material
Head
: Relatively large (HW/PW = 0.84–0.86); temples rounded; eyes entirely absent. Dorsal surface evenly covered with short, light-colored setae set in coarse circular pits. Microsculpture consisting of weakly impressed, irregular scalelike sculpticells, except a subtriangular patch on vertex where the sculpticels are coarse and conspicuous. Occipital region (concealed by pronotum) smooth, demarcated from rough vertex by a curved marginal line. Vertex with anterior supraorbital seta present on each side (Fig.
Antennae : Length approximately half of body length (AntL/ABL = 0.51–0.53). All antennomeres pubescent, filiform; antennomeres I–X with a subapical ring of long setae, antennomere XI with a ring of long setae just beyond middle, and a crown of long setae at apex. Several small, circular pores scattered in apical half of antennomere XI, concentrated near apex. Antennomere I shorter and thicker than antennomeres II–X. Four apical antennomeres gradually increasing in width; antennomere XI largest, slightly longer than antennomere II and clearly longer than all other antennomeres; gradually tapered apically. Antennae similar in both sexes.
Mouthparts
: Mandibles with scrobal seta present; narrow and elongate, both similar in size and shape but differing in dentation: right mandible with prominent anterior retinacular tooth, terebral tooth, posterior retinacular tooth and molar tooth; left mandible without anterior retinacular tooth, with small terebral, posterior retinacular and molar teeth (Suppl. material
Prothorax
: Pronotum small, narrower than elytra (PW/EW = 0.67) and less than one fourth body length (PL/ABL = 0.23); greatly narrowed posteriorly (PbW/PW = 0.39). Surface densely covered in light-colored setae, each set in a circular pore; setae whorled along midline: facing posteriorly in posterior half, medially in middle, and anteriorly in anterior half. Median longitudinal sulcus well impressed, but not reaching anterior or posterior margins. Lateral marginal bead lacking except for a short distance near lateral setae; otherwise, dorsal surface and hypomeron continuous. Posterior angles obsolete, without lateral setae; posterior impressions lacking. Posterior margin without bead, dorsal surface curved beneath itself, forming a smooth shelf that overhangs the mesothoracic pedicel. Prosternum (Fig.
Pterothorax
: Elytra moderately long, length slightly more than half of ABL; scutellum very narrow and elongate (Fig.
Elytral characters of Horologion species A H. speokoites holotype, elytra, oblique left lateral aspect B H. hubbardi paratype (
Male genitalia
: Relatively small (Length of ring sclerite / ABL = 0.16); ring sclerite similar to that of H. speokoites (
Scanning electron micrographs of the forebody of Horologion hubbardi A head of voucher CWH-452, dorsal aspect, clypeal setae indicated by white arrows B prosternum of non-type specimen, posterior aspect (head, pronotum and most of leg segments removed) C forebody of voucher CWH-452, ventral aspect.
Female genitalia
: (Fig.
Known only from Williams Cave, in Bath County, Virginia. In the database of the Virginia Speleological Survey (VSS, https://www.virginiacaves.org/), this cave is number 2779.
Williams Cave is also home to the eyeless trechine Pseudanophthalmus intersectus Barr, which also occurs in two other nearby caves in Bath County (Virginia DCR-DNH data). An individual of this species was found in the same microhabitat as the female paratype of H. hubbardi, and members of the two species presumably occur in syntopy. The only other carabid beetle known from Williams Cave is the surface tachyine Paratachys scitulus (LeConte), a common and widespread species in eastern North America; one specimen was found in organic debris just inside the entrance in August 2022.
Williams Cave is a large cave, with a surveyed length of 5.39 km (VSS data). The cave is shallow in relation to the overlying surface topology and is damp in places, with numerous ceiling drips and small pools. Most water in the cave is recharged through these ceiling drips. All specimens of H. hubbardi were found in or near small pools of water. Specimens were collected in March, August and September. Specimens from 2022 and 2023 were collected in somewhat distant sections of the cave, but COI sequences of the two are identical, suggesting they are not isolated. Immature life stages are unknown.
The differences in male protarsi (first and second protarsomeres asymmetrically expanded and dentate in H. hubbardi, only first protarsomere weakly dentate in H. speokoites), the form of the elytra (flattened, with prominent curved spines on the humeri in H. hubbardi, convex and with a small humeral carinal shelf without spines in H. speokoites), and the male genitalia, particularly the parameres (tapered and with 3 apical setae in H. hubbardi, broad and blunt with 6 apical setae in H. speokoites) are great enough to warrant recognition of the two as distinct taxa that are reproductively isolated. The two species are also geographically isolated, occurring 70 air km distant and on the opposite side of several large ridges of noncarbonate rock with numerous peaks above 1200 m, indicating complete isolation of these blind subterranean beetles (Fig.
This species is named in honor of its discoverer, David A. Hubbard, Jr., in recognition of his important contributions to cave biodiversity and conservation. In addition to many significant collections of cave carabids in Virginia, notable discoveries by Hubbard include the single known specimen of the Chinese stygobiontic dytiscid genus Sinodytes (
“Hubbard’s Hourglass Beetle”.
Our molecular data strongly support the placement of Horologion within the supertribe Trechitae, and that it is most closely related to the tribes Bembidarenini and Trechini, but does not belong within either of them. Therefore, the placement of the genus within its own tribe, Horologionini, is warranted. A more specific placement of Horologion as sister to Bembidarenini is recovered in the 8-gene tree and half of the single gene trees, with moderate support in the 8-gene tree and weak support in the single gene trees. Previous hypothesized placements of Horologion within Psydrini (
The morphological evidence mirrors the placement of Horologion revealed by DNA sequence data: Horologion is clearly a trechite, likely belonging in a clade with the tribes Bembidarenini and Trechini, and is possibly the sister taxon to Bembidarenini. Synapomorphies for most large clades (including tribes) of Trechitae are unreported as there has been insufficient study of the distribution of morphological character states. However, we have surveyed representatives of all tribes through the review of literature and specimens available to us, and can corroborate most of the proposed synapomorphies for Trechitae and the clade containing Bembidarenini + Trechini (
Horologion possesses character states of the sterna (conjunct mesocoxae, closed procoxae, visible metepimeron overlapping the first abdominal ventrite) and appendages (protibiae with “Grade B” antenna cleaner (
One of the key discoveries we have made is that the basal male protarsomeres of Horologion are dentate, as in most trechites. The previous suggestions that Horologion was not a trechite (van
The two character states considered by
The four fixed clypeal setae are not always arranged in the same way in members of the Horologion + Bembidarenini + Trechini clade. In most, including Horologion, the pores are set more or less in a straight line across the clypeus, well removed from its anterior margin. In Tasmanitachoides, the inner pair is situated close to the anterior margin, whereas the outer pair is in the typical position to the posterior of these. The examined individuals of Tasmanitachoides hobarti, T. murrumbidgensis, T. erwini, and T. kingi also have 1 or 2 additional clypeal setae on each side present near the anterior lateral angles of the clypeus. Horologion also possesses a third pair of clypeal setae in the same position, which are the same length as the inner pair, though smaller in diameter. The presence of only one pair of fixed clypeal setae has been reported in a small number of species of Trechini (
An additional character state that supports the Horologion + Bembidarenini + Trechini clade is the presence of four or more fixed setae on the ligula. Horologion and the four genera of Bembidarenini have four large apical setae on the ligula (plus two small inconspicuous setae) (Suppl. material
In our molecular results, support for a Horologion + Bembidarenini clade is moderately strong, as the clade is present in half of the single gene trees as well as the 8-gene tree (with SBS of 72)%. Morphological support for the clade is lacking, as most of the characters shared between Horologion and Bembidarenini (quadrisetose clypeus, quadrisetose ligula, suborbital setae, dorsally open median lobe of the aedeagus) are likely plesiomorphic in the Horologion + Bembidarenini + Trechini clade. Two characters included in the description of Bembidarenini (
The female genitalia of Horologion and bembidarenines are similar in structure, but we view the evidence provided by these similarities to be weak, as there is extensive variability present in the relatively few trechites studied. However, these characters provide some evidence that the two taxa are not members of Trechini. Horologion and bembidarenines possess subtriangular genital segments with elongate second gonocoxites that bear few setae, and all have a well-developed spermatheca that bears a narrow spermathecal gland. Spermathecae in trechites have not been thoroughly studied, but the form possessed by Horologion and the bembidarenine genera (compact, and with an attached gland) has been proposed as a derived form (
In contrast, members of Trechini possess a strongly transverse female genital segment with short gonocoxites, the spermathecal gland has been lost, and the spermatheca is reduced in all Trechina taxa studied to date, being baggy and poorly defined or entirely absent (
The subtribe Lovriciina, placed in Bembidiini sensu lato by
There is some evidence that lovriciines possess a quadrisetose clypeus and suborbital setae, the two synapomorphies of Horologion + Bembidarenini + Trechini (Fig.
From the beginning, Horologion was tagged as a strange and confusing carabid.
The most notable characters of Horologion are those of the thoracic ventrites and the humeral carinae. The procoxae are placed well anterior to the posterior margin of the pronotum, and the mesoventrite is elongate, extending well anterior of posterior margin of pronotum. The metacoxae are widely separated (Fig.
Horologion has long been recognized for its extreme rarity. In the most recent faunal treatment of West Virginia cave invertebrates (
The rarity of Horologion has most frequently been explained by its likely preference for a microhabitat that is impossible for humans to visit, such as deep soils or epikarst (
The finding of all specimens of H. hubbardi in or near drip pools supports the hypothesis that the terrestrial epikarst is the primary habitat of Horologion (
The possible variety of terrestrial epikarstic microhabitats is visualized in fig. 10 of
The two caves from which Horologion have been collected have little in common. Arbuckle Cave (written as “Arbuckle’s Cave” by Valentine [Fig.
Williams Cave is located in Bath County, Virginia, in the valley of the Cowpasture River, a small, meandering tributary of the James River. Numerous caves exist in the valley, including several that, like Williams, exceed 5 km in surveyed length; the longest of these is approximately 10.3 km long (VSS data). Williams is largely developed in the Devonian aged Little Cove Member of the Licking Creek Limestone of the Helderberg Group, with lower portions of the cave being developed in the Cherry Run Member of the Licking Creek Limestone (
Williams Cave has had a much more complex history of human use than Arbuckle. Evidence of Native American visitation exists in the cave, including pine torch fragments that have been carbon dated to between 995 and 1060 CE, and the cave was also mined for saltpeter during the American Civil War (
The location of the two Horologion caves on opposite sides of the high mountains in the Valley and Ridge province on the Virginia-West Virginia border is noteworthy;
At a broader geographic and taxonomic scale, the combined evidence from molecular and morphological data suggests that the most likely sister to Horologion is the tribe Bembidarenini, which occurs only in the southern hemisphere, making Horologion a true relict of a formerly widespread clade, and an important component of Appalachian biodiversity. While characterizing the species of Horologion as “single cave endemics” (
Our reexamination of the male type of H. speokoites and detailed examination of males and females of H. hubbardi allow us to confidently place Horologion in the supertribe Trechitae, in a clade that also contains the tribes Bembidarenini and Trechini. The combined morphological and molecular data strongly support a relationship with Trechini and the Gondwanan tribe Bembidarenini; the molecular data provide moderate support for a sister relationship with Bembidarenini. More extensive taxon sampling for molecular analyses including lovriciines could help solidify the systematic position of Horologion, as could more extensive DNA and morphological data of trechites.
The two species of Horologion represent a unique lineage within the Appalachian region and the entire northern hemisphere. Additional populations and species of Horologion probably remain to be discovered. That such elusive but distinctive taxa can be discovered in well-trodden areas highlights our limited knowledge of global biodiversity, and encourages experimentation with more diverse approaches to document it fully.
Cave bioinventory work by Tom Malabad and Katarina Kosič Ficco was supported by the Virginia Department of Conservation and Recreation, Division of Natural Heritage and was made possible in part by the Cave Conservancy of the Virginias. David J. Hubbard, Jr. assisted with cave collecting. Mystik Miller (West Virginia Cave Conservancy) and Todd Williams graciously facilitated cave access in West Virginia and Virginia, respectively. Amos Minchin and the Philly Grotto Virginia Field House provided lodging in Virginia, and the West Virginia Association for Cave Studies (WVACS) provided lodging in West Virginia. Phil Lucas and Wil Orndorff provided motivation and encouragement. The Virginia Speleological Survey and the West Virginia Speleological Survey provided technical assistance.
Use of the Clemson Electron Microscopy Facility was supported by an E.W. King Memorial Grant Fund award to Curt Harden in 2022. Funding for DNA extraction and sequencing of the Horologion specimens came from the U.S. National Science Foundation (Award DEB-1916263 to MSC), the Clemson University Experiment Station (SC-1700596 to MSC), and the John and Suzanne Morse Endowment for Arthropod Biodiversity at Clemson University. DNA sequence data of other carabids was funded by the Harold E. and Leona M. Rice Endowment Fund at Oregon State University. We thank Lucy A. Martin, Conor W. Grogan, Caitlin E. Hudecek, Danielle L. Mendez, and Cassandra M. Tillotson for their help with PCR reactions at Oregon State University.
Curt Harden extends special thanks to Gregory S. Chapman and Lily M. Thompson, for their enthusiasm and assistance on several memorable, though unsuccessful, trips to look for Horologion in shallow subterranean habitats; Augusto Degiovanni (Bologna, Italy) and James R. LaBonte (Oregon, USA) for exchanging valuable representatives of Trechitae; Alexander Anichtchenko (Latvia) for maintaining the website www.carabidae.org, which allowed rapid morphological comparisons between carabid taxa that would have otherwise been inaccessible; Charyn J. Micheli and Torsten Dikow for facilitating access to the
Lastly, we thank Peter H. Adler for a critical reading of an earlier draft, and Arnaud Faille and an anonymous reviewer for their valuable comments and suggestions which improved the quality of this manuscript.
This paper represents Technical Contribution No. 7241 of the Clemson University Experiment Station.
PCR primers and protocols
Data type: pdf
Explanation note: table S1. List of primers used in amplification (a) and Sanger sequencing (b); table S2. PCR programs. All began with an initial denaturing phase of 180s at 94 °C, with each cycling phase; table S3. PCR protocols for gene fragments. For nested and hemi-nested reactions, programs and primers for inner and outer reactions are indicated by 1 and 2, respectively.
Taxa sampled for phylogenetic analyses
Data type: pdf
Explanation note: table S4. table of taxa sampled for phylogenetic analyses, with associated GenBank numbers.
Additional photos of Horologion and Bembidarenini
Data type: pdf
Explanation note: figure S1. Habitus of Horologion hubbardi; figure S2. Horologion speokoites holotype (USNMENT 01374911); figure S3. Horologion hubbardi, SEM photographs of individual found dead (
Trees from Maximum Likelihood and Bootstrap analyses of single gene and 8-gene matrices
Data type: pdf
Explanation note: figure S5. Maximum likelihood trees of 8-gene concatenated matrix; figure S6. Maximum likelihood trees of 18S; figure S7. Maximum likelihood trees of 28S; figure S8. Maximum likelihood trees of COI; figure S9. Maximum likelihood trees of CAD2; figure S10. Maximum likelihood trees of CAD4; figure S11. Maximum likelihood trees of Wg; figure S12. Maximum likelihood trees of Topo; figure S13. Maximum likelihood trees of MSP; figure S14. Maximum likelihood trees of ArgK.